Sequence Similarity Clusters for the Entities in PDB 1MHQ

Entity #1 | Chains: A,B
ADP-ribosylation factor binding protein GGA2 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45648
95 % 1 1 34365 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 32812
70 % 1 1 29232
50 % 9 14 1718
40 % 9 14 1732
30 % 9 14 1693

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures