Sequence Similarity Clusters for the Entities in PDB 1MHH

Entity #1 | Chains: A,C
Fab, light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 3600
95 % 28 61 352
90 % 34 82 269
70 % 469 1704 2
50 % 1169 4154 1
40 % 1169 4155 1
30 % 1289 4901 1
Entity #2 | Chains: B,D
Fab, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 3606
95 % 2 7 4320
90 % 3 9 3480
70 % 563 2010 1
50 % 1170 4154 1
40 % 1170 4155 1
30 % 1290 4901 1
Entity #3 | Chains: E,F
protein L domain C protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44564
95 % 4 7 7347
90 % 4 7 7316
70 % 6 11 3496
50 % 6 11 3421
40 % 6 11 3309
30 % 6 11 3105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.