Sequence Similarity Clusters for the Entities in PDB 1MHH

Entity #1 | Chains: A,C
Fab, light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 3736
95 % 28 62 368
90 % 34 83 284
70 % 488 1775 2
50 % 1233 4367 1
40 % 1233 4367 1
30 % 1371 5151 1
Entity #2 | Chains: B,D
Fab, heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 3742
95 % 2 7 4494
90 % 3 9 3610
70 % 594 2111 1
50 % 1234 4367 1
40 % 1234 4367 1
30 % 1372 5151 1
Entity #3 | Chains: E,F
protein L domain C protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46227
95 % 4 7 7625
90 % 4 7 7585
70 % 6 11 3628
50 % 6 11 3548
40 % 6 11 3424
30 % 6 11 3210

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.