Sequence Similarity Clusters for the Entities in PDB 1MHE

Entity #1 | Chains: A,C
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HLA-E protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 3551
95 % 5 9 3229
90 % 5 9 3271
70 % 585 692 6
50 % 587 697 6
40 % 626 748 10
30 % 688 868 15
Entity #2 | Chains: B,D
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 511 600 2
95 % 547 644 3
90 % 555 653 4
70 % 717 885 4
50 % 730 907 3
40 % 730 907 9
30 % 730 907 14
Entity #3 | Chains: P,Q
PEPTIDE (VMAPRTVLL) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.