Sequence Similarity Clusters for the Entities in PDB 1MHE

Entity #1 | Chains: A,C
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HLA-E protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 2118
95 % 5 11 2208
90 % 5 11 2261
70 % 608 727 6
50 % 610 732 6
40 % 649 783 10
30 % 715 907 15
Entity #2 | Chains: B,D
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 526 624 2
95 % 562 668 3
90 % 570 677 4
70 % 741 922 4
50 % 754 944 3
40 % 754 944 7
30 % 754 944 12
Entity #3 | Chains: P,Q
PEPTIDE (VMAPRTVLL) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures