Sequence Similarity Clusters for the Entities in PDB 1MHC

Entity #1 | Chains: A,D
MHC CLASS I ANTIGEN H2-M3 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36721
95 % 1 1 28665
90 % 1 1 27677
70 % 1 1 25023
50 % 305 697 6
40 % 322 748 10
30 % 345 868 15
Entity #2 | Chains: B,E
MHC CLASS I ANTIGEN H2-M3 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 133 95
95 % 54 217 64
90 % 54 217 68
70 % 368 885 4
50 % 374 907 3
40 % 374 907 9
30 % 374 907 14
Entity #3 | Chains: C,F
NONAPEPTIDE FROM RAT NADH DEHYDROGENASE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.