Sequence Similarity Clusters for the Entities in PDB 1MHC

Entity #1 | Chains: A,D
MHC CLASS I ANTIGEN H2-M3 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 34037
95 % 1 1 26577
90 % 1 1 25684
70 % 1 1 23321
50 % 279 635 7
40 % 292 677 11
30 % 313 793 14
Entity #2 | Chains: B,E
MHC CLASS I ANTIGEN H2-M3 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 131 90
95 % 51 212 65
90 % 51 212 69
70 % 339 823 5
50 % 344 843 5
40 % 344 843 9
30 % 344 843 12
Entity #3 | Chains: C,F
NONAPEPTIDE FROM RAT NADH DEHYDROGENASE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.