Sequence Similarity Clusters for the Entities in PDB 1MH5

Entity #1 | Chains: A,L
IMMUNOGLOBULIN MS6-164 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40552
95 % 5 12 3772 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 23 33 970
70 % 763 2362 1
50 % 1564 4781 1
40 % 1564 4781 1
30 % 1752 5635 1
Entity #2 | Chains: B,H
IMMUNOGLOBULIN MS6-164 protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39754
95 % 2 2 23015 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 6 7 7756
70 % 754 2311 2
50 % 1565 4781 1
40 % 1565 4781 1
30 % 1753 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures