Sequence Similarity Clusters for the Entities in PDB 1MH5

Entity #1 | Chains: A,L
IMMUNOGLOBULIN MS6-164 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 5443
95 % 4 8 5732 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 23 33 999
70 % 825 2519 1
50 % 1691 5107 1
40 % 1965 5756 1
30 % 2395 7175 1
Entity #2 | Chains: B,H
IMMUNOGLOBULIN MS6-164 protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44428
95 % 2 2 25742 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 6 7 8252
70 % 818 2478 2
50 % 1692 5107 1
40 % 1966 5756 1
30 % 2396 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures