Sequence Similarity Clusters for the Entities in PDB 1MGY

Entity #1 | Chains: A
Bacteriorhodopsin protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20371
95 % 57 120 244 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 58 121 259
70 % 58 121 292
50 % 62 136 262
40 % 62 136 277
30 % 81 194 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.