Sequence Similarity Clusters for the Entities in PDB 1MFS

Entity #1 | Chains: A
HIV-1 NUCLEOCAPSID PROTEIN protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 28867
95 % 3 4 20607
90 % 4 6 13346
70 % 4 6 12516
50 % 4 6 11136
40 % 4 6 10014
30 % 4 6 8154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures