Sequence Similarity Clusters for the Entities in PDB 1MFQ

Entity #1 | Chains: A
7S RNA of human SRP rna, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
signal recognition particle 19kDa protein protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 10277
95 % 1 7 10284
90 % 1 7 10145
70 % 1 7 9613
50 % 1 7 8734
40 % 1 7 7995
30 % 1 7 7041
Entity #3 | Chains: C
signal recognition particle 54kDa protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63976
95 % 1 1 43975
90 % 1 1 41784
70 % 1 1 36785
50 % 1 1 31410
40 % 1 1 27756
30 % 1 1 23510

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.