Sequence Similarity Clusters for the Entities in PDB 1MFQ

Entity #1 | Chains: A
7S RNA of human SRP rna, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
signal recognition particle 19kDa protein protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 10116
95 % 1 7 10116
90 % 1 7 9986
70 % 1 7 9470
50 % 1 7 8614
40 % 1 7 7894
30 % 1 7 6967
Entity #3 | Chains: C
signal recognition particle 54kDa protein protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63235
95 % 1 1 43473
90 % 1 1 41325
70 % 1 1 36429
50 % 1 1 31141
40 % 1 1 27527
30 % 1 1 23329

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.