Sequence Similarity Clusters for the Entities in PDB 1MFD

Entity #1 | Chains: L
IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27381
95 % 6 39 444
90 % 8 45 387
70 % 559 2280 1
50 % 1151 4619 1
40 % 1151 4619 1
30 % 1277 5440 1
Entity #2 | Chains: H
IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 20800
95 % 4 4 18142
90 % 6 11 4101
70 % 557 2238 2
50 % 1152 4619 1
40 % 1152 4619 1
30 % 1278 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.