Sequence Similarity Clusters for the Entities in PDB 1MFA

Entity #1 | Chains: L
IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67329
95 % 1 1 46344
90 % 2 13 2179
70 % 2 13 2172
50 % 29 308 21
40 % 101 933 5
30 % 112 1061 7
Entity #2 | Chains: H
IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68008
95 % 1 1 46811
90 % 1 1 44381
70 % 8 85 260
50 % 71 580 7
40 % 102 933 5
30 % 113 1061 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures