Sequence Similarity Clusters for the Entities in PDB 1MFA

Entity #1 | Chains: L
IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47696
95 % 1 1 46512
90 % 1 1 44205
70 % 2 13 2232
50 % 29 317 23
40 % 31 361 27
30 % 417 7175 1
Entity #2 | Chains: H
IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56746
95 % 1 1 46511
90 % 1 1 44204
70 % 8 87 261
50 % 74 609 6
40 % 342 5756 1
30 % 418 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures