Sequence Similarity Clusters for the Entities in PDB 1MF8

Entity #1 | Chains: A
CALMODULIN-DEPENDENT CALCINEURIN A SUBUNIT, ALPHA ISOFORM protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 6098
95 % 8 9 5033
90 % 8 9 5052
70 % 9 10 4573
50 % 9 10 4386
40 % 9 10 4177
30 % 65 71 461
Entity #2 | Chains: B
CALCINEURIN B SUBUNIT ISOFORM 1 protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 12 3670
95 % 12 12 4462 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 12 12 4483
70 % 12 12 4411
50 % 13 13 3990
40 % 13 13 3818
30 % 212 367 51
Entity #3 | Chains: C
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 102 112 112
95 % 116 126 144 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 117 127 153
70 % 173 184 129
50 % 211 223 111
40 % 225 241 127
30 % 232 251 131
Entity #4 | Chains: D
CYCLOSPORIN A protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.