Sequence Similarity Clusters for the Entities in PDB 1MF2

Entity #1 | Chains: L,M
MONOCLONAL ANTIBODY F11.2.32 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20456
95 % 5 12 941 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 37 89 167
70 % 1035 1841 2
50 % 2552 4537 1
40 % 2552 4537 1
30 % 2930 5342 1
Entity #2 | Chains: H,N
MONOCLONAL ANTIBODY F11.2.32 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20206
95 % 2 2 17632 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 9 2636
70 % 1238 2197 1
50 % 2553 4537 1
40 % 2553 4537 1
30 % 2931 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.