Sequence Similarity Clusters for the Entities in PDB 1MEX

Entity #1 | Chains: L
Fab 29G12 light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60391
95 % 1 18 1878 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.0
PDBFlex
90 % 1 69 407
70 % 4 2287 1
50 % 7 4633 1
40 % 7 4633 1
30 % 7 5461 1
Entity #2 | Chains: H
Fab 29G12 heavy chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60110
95 % 1 1 42141
90 % 1 2 29555
70 % 4 2244 2
50 % 8 4633 1
40 % 8 4633 1
30 % 8 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.