Sequence Similarity Clusters for the Entities in PDB 1MEU

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14058
95 % 370 580 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 400 642 2
70 % 419 669 5
50 % 425 695 5
40 % 434 705 9
30 % 436 707 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures