Sequence Similarity Clusters for the Entities in PDB 1MEQ

Entity #1 | Chains: A
Exterior Membrane Glycoprotein (GP120) protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75318
95 % 1 1 52624
90 % 1 1 49904
70 % 1 1 43681
50 % 1 1 37293
40 % 1 1 32912
30 % 1 1 27964

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures