Sequence Similarity Clusters for the Entities in PDB 1MEQ

Entity #1 | Chains: A
Exterior Membrane Glycoprotein (GP120) protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62532
95 % 1 1 50836
90 % 1 1 48225
70 % 1 1 40749
50 % 1 1 34578
40 % 1 1 30317
30 % 1 1 25325

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures