Sequence Similarity Clusters for the Entities in PDB 1MEL

Entity #1 | Chains: A,B
VH SINGLE-DOMAIN ANTIBODY protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20321
95 % 5 5 8636
90 % 5 6 7037
70 % 197 285 20
50 % 305 461 8
40 % 523 785 5
30 % 592 910 8
Entity #2 | Chains: L,M
LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 549 605 3
95 % 601 658 4
90 % 615 675 5
70 % 826 891 6
50 % 832 899 6
40 % 864 933 10
30 % 864 933 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.