Sequence Similarity Clusters for the Entities in PDB 1MEE

Entity #1 | Chains: A
MESENTERICOPEPTIDASE protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57087
95 % 3 5 10358 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 5 10235
70 % 48 91 439
50 % 67 114 427
40 % 141 226 191
30 % 145 240 193
Entity #2 | Chains: I
EGLIN C protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29878
95 % 7 15 3343 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 15 3398
70 % 7 15 3365
50 % 7 15 3279
40 % 7 15 3183
30 % 29 46 1119

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.