Sequence Similarity Clusters for the Entities in PDB 1MEC

Entity #1 | Chains: 1
MENGO VIRUS COAT PROTEIN (SUBUNIT VP1) protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54423
95 % 2 2 27705
90 % 2 2 26760
70 % 2 2 24267
50 % 6 6 9536
40 % 6 6 8661
30 % 6 6 7576
Entity #2 | Chains: 2
MENGO VIRUS COAT PROTEIN (SUBUNIT VP2) protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36374
95 % 2 2 28169
90 % 2 2 27208
70 % 7 7 9225
50 % 7 7 8401
40 % 8 8 6792
30 % 166 178 170
Entity #3 | Chains: 3
MENGO VIRUS COAT PROTEIN (SUBUNIT VP1) protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56474
95 % 2 2 28827
90 % 2 2 27822
70 % 2 2 25162
50 % 6 6 9713
40 % 27 27 330
30 % 177 189 152
Entity #4 | Chains: 4
MENGO VIRUS COAT PROTEIN (SUBUNIT VP1) protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45995
95 % 2 2 34343
90 % 2 2 32860
70 % 2 2 29352
50 % 3 3 18067
40 % 3 3 16097
30 % 20 20 679

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.