Sequence Similarity Clusters for the Entities in PDB 1ME5

Entity #1 | Chains: A,B,C
ALKYLHYDROPEROXIDASE D protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27259
95 % 4 4 3090 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 4 4 3139
70 % 4 4 3075
50 % 4 4 3027
40 % 4 4 2963
30 % 4 4 2737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures