Sequence Similarity Clusters for the Entities in PDB 1MDZ

Entity #1 | Chains: A
ArnB aminotransferase protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26782
95 % 3 4 16960 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 3 4 16631
70 % 3 4 15506
50 % 3 4 13622
40 % 4 5 9133
30 % 30 37 513

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures