Sequence Similarity Clusters for the Entities in PDB 1MDW

Entity #1 | Chains: A,B
Calpain II, catalytic subunit protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34808
95 % 1 1 27507 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 26582
70 % 8 13 3627
50 % 8 15 2969
40 % 8 15 2915
30 % 8 15 2729

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.