Sequence Similarity Clusters for the Entities in PDB 1MDW

Entity #1 | Chains: A,B
Calpain II, catalytic subunit protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35789
95 % 1 1 28297
90 % 1 1 27317
70 % 8 13 3726
50 % 8 15 3042
40 % 8 15 2982
30 % 8 15 2796

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures