Sequence Similarity Clusters for the Entities in PDB 1MDW

Entity #1 | Chains: A,B
Calpain II, catalytic subunit protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43350
95 % 1 1 36261
90 % 1 1 34624
70 % 8 13 3964
50 % 8 19 1676
40 % 8 19 1668
30 % 8 19 1644

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures