Sequence Similarity Clusters for the Entities in PDB 1MDV

Entity #1 | Chains: A,B
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47592
95 % 3 6 10009 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.7
PDBFlex
90 % 3 6 9889
70 % 15 19 2932
50 % 16 22 2474
40 % 22 30 1830
30 % 24 32 1567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures