Sequence Similarity Clusters for the Entities in PDB 1MDV

Entity #1 | Chains: A,B
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46325
95 % 3 6 9755 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 3 6 9647
70 % 15 19 2840
50 % 16 22 2383
40 % 22 30 1762
30 % 24 32 1524

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.