Sequence Similarity Clusters for the Entities in PDB 1MDT

Entity #1 | Chains: A,B
DIPHTHERIA TOXIN protein, length: 535 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5517
95 % 6 10 3353 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 7.5
PDBFlex
90 % 6 10 3402
70 % 6 10 3375
50 % 6 10 3289
40 % 6 10 3194
30 % 6 10 3006

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.