Sequence Similarity Clusters for the Entities in PDB 1MDT

Entity #1 | Chains: A,B
DIPHTHERIA TOXIN protein, length: 535 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5618
95 % 6 10 3418 Flexibility: Medium
Max RMSD: 16.7, Avg RMSD: 7.9
PDBFlex
90 % 6 10 3470
70 % 6 10 3433
50 % 6 10 3338
40 % 6 10 3237
30 % 6 10 3046

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures