Sequence Similarity Clusters for the Entities in PDB 1MDP

Entity #1 | Chains: 1,2
MALTODEXTRIN BINDING PROTEIN protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33665
95 % 59 106 226 Flexibility: Low
Max RMSD: 8.8, Avg RMSD: 2.2
PDBFlex
90 % 62 126 155
70 % 86 172 94
50 % 86 172 131
40 % 86 172 146
30 % 100 189 148

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.