Sequence Similarity Clusters for the Entities in PDB 1MDO

Entity #1 | Chains: A
ArnB aminotransferase protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25549
95 % 1 4 16214 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 4 15900
70 % 1 4 14852
50 % 1 4 13071
40 % 2 5 8761
30 % 17 36 497

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.