Sequence Similarity Clusters for the Entities in PDB 1MDN

Entity #1 | Chains: A,B
PROTEIN (MYOGLOBIN) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 3756
95 % 10 18 1717 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 90 104 341
70 % 357 396 75
50 % 359 398 102
40 % 369 408 122
30 % 748 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures