Sequence Similarity Clusters for the Entities in PDB 1MDN

Entity #1 | Chains: A,B
PROTEIN (MYOGLOBIN) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9642
95 % 9 17 1710 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 90 104 331
70 % 340 379 74
50 % 342 381 100
40 % 352 391 122
30 % 719 1218 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures