Sequence Similarity Clusters for the Entities in PDB 1MDN

Entity #1 | Chains: A,B
PROTEIN (MYOGLOBIN) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9848
95 % 9 17 1752 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 90 104 338
70 % 348 387 74
50 % 350 389 100
40 % 360 399 122
30 % 727 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures