Sequence Similarity Clusters for the Entities in PDB 1MDN

Entity #1 | Chains: A,B
PROTEIN (MYOGLOBIN) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9352
95 % 9 17 1648 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 89 103 317
70 % 334 372 73
50 % 336 374 98
40 % 346 384 118
30 % 701 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.