Sequence Similarity Clusters for the Entities in PDB 1MDF

Entity #1 | Chains: A
2,3-dihydroxybenzoate-AMP ligase protein, length: 539 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25261
95 % 2 3 21490 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 3 20890
70 % 2 3 19169
50 % 2 3 16669
40 % 7 9 4136
30 % 87 104 296

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.