Sequence Similarity Clusters for the Entities in PDB 1MD9

Entity #1 | Chains: A
2,3-dihydroxybenzoate-AMP ligase protein, length: 539 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 24664
95 % 3 3 20975 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 3 3 20390
70 % 3 3 18781
50 % 3 3 16342
40 % 9 9 4051
30 % 104 104 290

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.