Sequence Similarity Clusters for the Entities in PDB 1MD8

Entity #1 | Chains: A
C1R COMPLEMENT SERINE PROTEASE protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66371
95 % 1 2 34320 Flexibility: Medium
Max RMSD: 3.1, Avg RMSD: 3.1
PDBFlex
90 % 1 2 30035
70 % 1 2 26938
50 % 1 2 23060
40 % 3 4 10942
30 % 3 6 3801

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures