Sequence Similarity Clusters for the Entities in PDB 1MD8

Entity #1 | Chains: A
C1R COMPLEMENT SERINE PROTEASE protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53927
95 % 1 2 27445 Flexibility: Medium
Max RMSD: 3.1, Avg RMSD: 3.1
PDBFlex
90 % 1 2 26525
70 % 1 2 24069
50 % 1 2 20721
40 % 2 3 14950
30 % 3 6 3592

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.