Sequence Similarity Clusters for the Entities in PDB 1MD7

Entity #1 | Chains: A
C1R COMPLEMENT SERINE PROTEASE protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56216
95 % 2 2 28673 Flexibility: Medium
Max RMSD: 3.1, Avg RMSD: 3.1
PDBFlex
90 % 2 2 27675
70 % 2 2 24988
50 % 2 2 21464
40 % 3 3 15526
30 % 5 6 3743

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1MD8 1 A C1R COMPLEMENT SERINE PROTEASE C-terminal CCP-SP domain 9606 3.4.21.41 | Details
2 1MD7 1 A C1R COMPLEMENT SERINE PROTEASE C-terminal CCP-SP domain 9606 3.4.21.41 | Details