Sequence Similarity Clusters for the Entities in PDB 1MD2

Entity #1 | Chains: D,E,F,G,H
CHOLERA TOXIN B SUBUNIT protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 19 224
95 % 8 28 178
90 % 9 50 72
70 % 9 53 80
50 % 9 53 110
40 % 9 53 133
30 % 9 53 144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.