Sequence Similarity Clusters for the Entities in PDB 1MCV

Entity #1 | Chains: A
Elastase 1 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 75 117 273
95 % 75 117 350 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.3
PDBFlex
90 % 75 117 368
70 % 75 117 415
50 % 77 123 467
40 % 798 1912 4
30 % 802 1926 7
Entity #2 | Chains: I
HEI-TOE I protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67581
95 % 1 1 54742
90 % 1 1 51825
70 % 5 14 3182
50 % 7 19 2492
40 % 7 19 2446
30 % 7 19 2282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures