Sequence Similarity Clusters for the Entities in PDB 1MCV

Entity #1 | Chains: A
Elastase 1 protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 33 1246
95 % 75 117 334 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.3
PDBFlex
90 % 75 117 353
70 % 75 117 389
50 % 77 123 440
40 % 780 1864 4
30 % 785 1886 6
Entity #2 | Chains: I
HEI-TOE I protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76994
95 % 1 1 53629
90 % 1 1 50808
70 % 5 14 2997
50 % 7 19 2351
40 % 7 19 2329
30 % 7 19 2220

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures