Sequence Similarity Clusters for the Entities in PDB 1MCQ

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 18 1169
95 % 15 20 1418 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 55 86 241
70 % 1415 2362 1
50 % 2877 4781 1
40 % 2877 4781 1
30 % 3319 5635 1
Entity #2 | Chains: P
PEPTIDE N-ACETYL-L-HIS-D-PRO-NH2 protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5WCA 2 L VRC315 27-1C08 Fab Light chain 9606
2 5N4J 1 L LIGHT CHAIN 9606
3 5M6A 1 A, B, C, D Bence-Jones light chain 9606
4 5UKN 2 L DH522UCA Fab fragment light chain 9544
5 4F57 1 L Light chain of Fab of a neutralizing antibody L1 light chain of L1 9606
6 5NHW 2 L anti-human ActRII Bimagrumab Fab light-chain Fab light-chain 9606
7 3U2S 2 B, L PG9 light chain 9606
8 5WCD 2 L VRC315 04-1D02 Fab Light chain 9606
9 5TPP 1 L DH270.5 Fab heavy chain 9606
10 4H8W 3 L FAB LIGHT CHAIN OF ADCC AND NON-NEUTRALIZING ANTI-HIV-1 ANTIBODY N5-I5 9606
11 3TNM 2 B, L Fab light chain of human anti-HIV-1 Env antibody A32 9606
12 3GJF 4 K, L Antibody light chain 9606
13 2MCG 1 1, 2 IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
14 1LGV 1 A, B IMMUNOGLOBULIN LAMBDA LIGHT CHAIN 9606
15 3TNN 2 B, D, F, L Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5 9606
16 5GKR 2 B, D lambda, Fab (light chain) 9606
17 5UKP 2 L DH522.1 Fab fragment light chain 9544
18 5UKQ 2 L DH522.2 Fab fragment light chain 9544
19 1DCL 1 A, B MCG A LAMBDA V TYPE LIGHT-CHAIN DIMER 9606
20 1JVK 1 A, B IMMUNOGLOBULIN LAMBDA LIGHT CHAIN 9606
21 3MCG 1 1, 2 IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
22 5WHJ 2 L DX-2507 Fab light chain 9606
23 3U4E 3 B, L PG9 Light Chain 9606
24 5GKS 2 B, D lambda, Fab (light chain) 9606
25 1LHZ 1 A, B IMMUNOGLOBULIN LAMBDA LIGHT CHAIN 9606
26 5M6I 1 B light chain dimer 9606
27 5M6I 2 A light chain dimer 9606
28 5UKO 2 L DH522IA Fab fragment light chain 9544
29 3GHE 1 L Fab 537-10D, light chain 9606
30 4YAQ 2 B, L PG9_N100FY Light Chain 9606
31 5WHK 2 L DX-2507 Fab light chain 9606
32 5U15 2 B, L DH270.UCA3 light chain 9606
33 2OMN 1 A, B Bence Jones KWR Protein - Immunoglobulin Light Chain 9606
34 4NKI 2 L Fab heavy chain 9606
35 5F6I 2 C DH428 Antibody Light Chain 9544
36 3LRS 2 B, D, F, L PG-16 Light Chain Fab 9606
37 3GJE 1 A, L Fab Light Chain 9606
38 4DQO 2 L PG16 Fab Light Chain 9606
39 5WCC 2 B, L VRC 315 02-1F07 Fab Light chain 9606
40 1MCI 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
41 3MUG 1 A, C, E, G, I, K Antibody PG16 Light Chain 9606
42 4F58 1 L, M, N, O Light chain of Fab of a neutralizing antibody L3 9606
43 1MCN 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
44 1MCS 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
45 5TPL 1 L DH270.3 Fab light chain 9606
46 1MCK 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
47 1MCL 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
48 1MCD 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
49 1MCE 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
50 5TQA 2 B, L DH270.6 Fab light chain 9606
51 1MCJ 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
52 1MCF 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
53 1MCC 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
54 1MCB 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
55 1MCQ 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
56 1MCR 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
57 2OLD 1 A, B Bence Jones KWR Protein - Immunoglobulin Light Chain 9606
58 5UKR 2 L DH522.2 Fab fragment light chain 9544
59 5LCV 3 L BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11 Fab fragment, light chain 9606
60 1A8J 1 H, L IMMUNOGLOBULIN LAMBDA LIGHT CHAIN DIMER (MCG) LIGHT CHAIN DIMER WITH ASPARTAME 9606
61 2JB5 2 L FAB FRAGMENT MOR03268 LIGHT CHAIN 9606
62 5F6H 1 J, L, N, P DH427 Antibody Light Chain 9544
63 3HAE 4 G, L, N, S Antibody light chain 9606
64 5VK2 4 E, G, L Fab 37.7H light chain 9606
65 2JB6 1 A, L FAB FRAGMENT MOR03268 LIGHT CHAIN 9606
66 1MCH 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
67 1MCW 2 M IMMUNOGLOBULIN MCG (LIGHT CHAIN) 9606
68 5W4L 4 I, L Antibody N5-i5 light chain 9606
69 2OMB 1 A, B, C, D Bence Jones KWR Protein - Immunoglobulin Light Chain 9606
70 4YC2 3 C, L The antibody A32 Fab light chain. 9606
71 4UT6 3 L, M BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 FAB FRAGMENT, LIGHT CHAIN, RESIDUES -1-213 9606
72 4RFO 4 L N60-i3 Fab light chain 9606
73 3U36 2 B, D, F, L PG9 Fab light chain 9606
74 4YBL 3 C, L A32 antibody light chain 9606
75 3MUH 1 L Antibody PG9 light chain 9606
76 5KJR 4 L N60-I3 FAB LIGHT CHAIN 9606
77 1MCO 1 L IGG1 MCG INTACT ANTIBODY (LIGHT CHAIN) 9606
78 5U0R 2 L DH270.UCA1 light chain 9606
79 4UTB 3 L, M BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11 FAB FRAGMENT LIGHT CHAIN, RESIDUES -1-213 9606
80 5T3Z 6 E IOMA Light Chain 9606
81 3MME 2 B, D, L PG16 LIGHT CHAIN FAB 9606
82 5N0A 3 L, M BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11 FAB FRAGMENT LIGHT CHAIN, RESIDUES 1-213. The residues numbering is the KABAT scheme numbering. 9606
83 5T3X 6 E IOMA Light Chain 9606
84 5N09 3 L, M BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11 - Light chain 9606
85 5F6J 2 A, F DH427 Antibody Light Chain 9544
86 5VJ6 6 L PG9 Fab light chain 9606