Sequence Similarity Clusters for the Entities in PDB 1MCQ

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 19 1346
95 % 15 20 1542 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 55 86 257
70 % 1567 2637 1
50 % 3208 5362 1
40 % 3649 6051 1
30 % 4484 7514 1
Entity #2 | Chains: P
PEPTIDE N-ACETYL-L-HIS-D-PRO-NH2 protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2MCG 1 1, 2 IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
2 1DCL 1 A, B MCG A LAMBDA V TYPE LIGHT-CHAIN DIMER 9606
3 3MCG 1 1, 2 IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
4 1MCI 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
5 1MCN 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
6 1MCS 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
7 1MCK 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
8 1MCL 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
9 1MCD 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
10 1MCE 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
11 1MCJ 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
12 1MCF 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
13 1MCC 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
14 1MCB 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
15 1MCQ 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
16 1MCR 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
17 1A8J 1 H, L IMMUNOGLOBULIN LAMBDA LIGHT CHAIN DIMER (MCG) LIGHT CHAIN DIMER WITH ASPARTAME 9606
18 1MCH 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
19 1MCW 2 M IMMUNOGLOBULIN MCG (LIGHT CHAIN) 9606