Sequence Similarity Clusters for the Entities in PDB 1MCQ

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 18 1169
95 % 15 20 1418 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 55 86 241
70 % 1415 2362 1
50 % 2877 4781 1
40 % 2877 4781 1
30 % 3319 5635 1
Entity #2 | Chains: P
PEPTIDE N-ACETYL-L-HIS-D-PRO-NH2 protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2MCG 1 1, 2 IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
2 3MCG 1 1, 2 IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
3 1MCI 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
4 1MCN 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
5 1MCS 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
6 1MCK 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
7 1MCL 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
8 1MCD 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
9 1MCE 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
10 1MCJ 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
11 1MCF 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
12 1MCC 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
13 1MCB 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
14 1MCQ 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
15 1MCR 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
16 1A8J 1 H, L IMMUNOGLOBULIN LAMBDA LIGHT CHAIN DIMER (MCG) LIGHT CHAIN DIMER WITH ASPARTAME 9606
17 1MCH 1 A, B IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) 9606
18 1MCW 2 M IMMUNOGLOBULIN MCG (LIGHT CHAIN) 9606