Sequence Similarity Clusters for the Entities in PDB 1MCP

Entity #1 | Chains: L
IGA-KAPPA MCPC603 FAB (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38466
95 % 9 13 3591
90 % 65 83 287
70 % 1228 1803 2
50 % 2993 4435 1
40 % 2993 4435 1
30 % 3501 5225 1
Entity #2 | Chains: H
IGA-KAPPA MCPC603 FAB (HEAVY CHAIN) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38301
95 % 1 2 29355
90 % 1 2 28278
70 % 2 3 19575
50 % 2994 4435 1
40 % 2994 4435 1
30 % 3502 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.