Sequence Similarity Clusters for the Entities in PDB 1MCN

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 18 1092
95 % 5 20 1358 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 28 69 269
70 % 199 394 10
50 % 2400 4501 1
40 % 2400 4501 1
30 % 2745 5303 1
Entity #2 | Chains: P
PEPTIDE N-ACETYL-D-HIS-L-PRO-NH2 protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.