Sequence Similarity Clusters for the Entities in PDB 1MCE

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 18 1122
95 % 10 20 1382 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.3
PDBFlex
90 % 37 72 262
70 % 1252 2264 1
50 % 2557 4587 1
40 % 2557 4587 1
30 % 2929 5392 1
Entity #2 | Chains: P
PEPTIDE N-ACETYL-L-GLN-D-PHE-L-HIS-D-PRO-B-ALA-OH protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.