Sequence Similarity Clusters for the Entities in PDB 1MCB

Entity #1 | Chains: A,B
IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 19 1260
95 % 14 20 1452 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 7.2
PDBFlex
90 % 54 86 247
70 % 1506 2519 1
50 % 3068 5107 1
40 % 3496 5756 1
30 % 4308 7175 1
Entity #2 | Chains: P
PEPTIDE N-ACETYL-L-GLN-D-PHE-L-HIS-D-PRO-OH protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures