Sequence Similarity Clusters for the Entities in PDB 1MBX

Entity #1 | Chains: A,B
ATP-Dependent clp Protease ATP-Binding Subunit clp A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 4343
95 % 4 9 5130 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 4 9 5152
70 % 4 9 5072
50 % 4 9 4850
40 % 4 9 4591
30 % 4 9 4208
Entity #2 | Chains: C,D
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2184
95 % 6 12 2579 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 6 12 2627
70 % 6 12 2613
50 % 6 12 2581
40 % 6 12 2538
30 % 6 12 2402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3O2H 1 A ATP-dependent Clp protease adaptor protein ClpS 562
2 2W9R 1 A ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS CLPS PROTEIN FROM ESCHERICHIA COLI IN COMPLEX WITH LEU-PEPTIDE 562
3 3O2B 1 A, C ATP-dependent Clp protease adaptor protein ClpS unp residues 2-106 562
4 1R6O 2 C, D ATP-dependent Clp protease adaptor protein clpS 562
5 2WA8 1 A, C ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS CLPS PROTEIN FROM E. COLI AND N-END RULE PEPTIDE 562
6 1MBX 2 C, D Protein yljA 562
7 1R6Q 2 C, D ATP-dependent Clp protease adaptor protein clpS 562
8 1MBU 2 C, D Protein yljA 562
9 1MG9 1 A protein yljA 562
10 1LZW 1 A Protein yljA 562
11 2WA9 1 A, B, C, D, E, F, G ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS 562
12 1MBV 2 B Protein yljA 562