Sequence Similarity Clusters for the Entities in PDB 1MBX

Entity #1 | Chains: A,B
ATP-Dependent clp Protease ATP-Binding Subunit clp A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 4599
95 % 4 9 5391 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 4 9 5418
70 % 4 9 5318
50 % 4 9 5069
40 % 4 9 4790
30 % 4 9 4389
Entity #2 | Chains: C,D
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2314
95 % 6 12 2712 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 6 12 2765
70 % 6 12 2750
50 % 6 12 2712
40 % 6 12 2661
30 % 6 12 2510

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures