Sequence Similarity Clusters for the Entities in PDB 1MBX

Entity #1 | Chains: A,B
ATP-Dependent clp Protease ATP-Binding Subunit clp A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 4207
95 % 4 9 4979 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 4 9 4998
70 % 4 9 4932
50 % 4 9 4732
40 % 4 9 4482
30 % 4 9 4107
Entity #2 | Chains: C,D
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2130
95 % 6 12 2514 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 6 12 2565
70 % 6 12 2548
50 % 6 12 2518
40 % 6 12 2474
30 % 6 12 2343

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.