Sequence Similarity Clusters for the Entities in PDB 1MBV

Entity #1 | Chains: A
ATP-Dependent clp Protease ATP-Binding Subunit clp A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 4592
95 % 9 9 5385 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 9 9 5412
70 % 9 9 5311
50 % 9 9 5064
40 % 9 9 4784
30 % 9 9 4382
Entity #2 | Chains: B
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 2313
95 % 12 12 2709 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 12 12 2762
70 % 12 12 2748
50 % 12 12 2710
40 % 12 12 2658
30 % 12 12 2507

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures