Sequence Similarity Clusters for the Entities in PDB 1MBV

Entity #1 | Chains: A
ATP-Dependent clp Protease ATP-Binding Subunit clp A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 4217
95 % 9 9 4987 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 9 9 5009
70 % 9 9 4943
50 % 9 9 4742
40 % 9 9 4489
30 % 9 9 4116
Entity #2 | Chains: B
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 2135
95 % 12 12 2526 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 12 12 2577
70 % 12 12 2561
50 % 12 12 2529
40 % 12 12 2487
30 % 12 12 2357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.