Sequence Similarity Clusters for the Entities in PDB 1MBV

Entity #1 | Chains: A
ATP-Dependent clp Protease ATP-Binding Subunit clp A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 4514
95 % 9 9 5312 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 9 9 5333
70 % 9 9 5234
50 % 9 9 5001
40 % 9 9 4730
30 % 9 9 4326
Entity #2 | Chains: B
Protein yljA protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 2287
95 % 12 12 2675 Flexibility: Low
Max RMSD: 13.2, Avg RMSD: 1.3
PDBFlex
90 % 12 12 2727
70 % 12 12 2716
50 % 12 12 2677
40 % 12 12 2626
30 % 12 12 2475

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures