Sequence Similarity Clusters for the Entities in PDB 1MB2

Entity #1 | Chains: A,B,C,D,E,F
TRYPTOPHAN-TRNA LIGASE protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 1071
95 % 10 12 1112 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.1
PDBFlex
90 % 10 13 1040
70 % 10 13 1086
50 % 14 17 995
40 % 25 29 664
30 % 25 29 661

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures