Sequence Similarity Clusters for the Entities in PDB 1MAY

Entity #1 | Chains: A
BETA-TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 303 428 43
95 % 328 474 32 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 328 474 35
70 % 368 562 20
50 % 397 714 16
40 % 759 1912 4
30 % 762 1926 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures