Sequence Similarity Clusters for the Entities in PDB 1MAW

Entity #1 | Chains: A,B,C,D,E,F
TRYPTOPHAN-TRNA LIGASE protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 11 880
95 % 11 12 1037 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.1
PDBFlex
90 % 12 13 986
70 % 12 13 1028
50 % 15 16 973
40 % 25 27 677
30 % 26 28 634

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.