Sequence Similarity Clusters for the Entities in PDB 1MAJ

Entity #1 | Chains: A
IGG2A-KAPPA 26-10 FV (LIGHT CHAIN) protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46564
95 % 1 2 34875
90 % 12 13 3408
70 % 19 20 1885
50 % 306 308 21
40 % 931 933 5
30 % 1059 1061 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures