Sequence Similarity Clusters for the Entities in PDB 1MAH

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 60 63 209
95 % 83 86 212 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 83 86 222
70 % 104 107 175
50 % 241 251 105
40 % 241 251 129
30 % 320 343 73
Entity #2 | Chains: F
FASCICULIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 7684
95 % 9 10 7567 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 9 10 7515
70 % 10 11 6470
50 % 23 37 1391
40 % 52 124 311
30 % 53 126 309

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures