Sequence Similarity Clusters for the Entities in PDB 1MAH

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 56 59 174
95 % 80 83 147
90 % 80 83 158
70 % 93 96 164
50 % 215 223 96
40 % 215 223 119
30 % 278 296 64
Entity #2 | Chains: F
FASCICULIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 6367
95 % 9 10 6330
90 % 9 10 6306
70 % 10 11 5455
50 % 23 37 1181
40 % 49 117 260
30 % 50 119 270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.