Sequence Similarity Clusters for the Entities in PDB 1MAH

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 60 186
95 % 81 84 147
90 % 81 84 158
70 % 102 105 157
50 % 225 233 96
40 % 225 233 120
30 % 294 312 62
Entity #2 | Chains: F
FASCICULIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 6525
95 % 9 10 6482
90 % 9 10 6458
70 % 10 11 5585
50 % 23 37 1207
40 % 49 118 265
30 % 50 120 273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.