Sequence Similarity Clusters for the Entities in PDB 1MAH

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 62 199
95 % 82 85 199 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 82 85 209
70 % 103 106 170
50 % 233 242 103
40 % 233 242 129
30 % 304 325 77
Entity #2 | Chains: F
FASCICULIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 7349
95 % 9 10 7230
90 % 9 10 7188
70 % 10 11 6197
50 % 23 37 1337
40 % 52 121 298
30 % 53 123 301

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.