Sequence Similarity Clusters for the Entities in PDB 1MAH

Entity #1 | Chains: A
ACETYLCHOLINESTERASE protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 60 187
95 % 81 84 149
90 % 81 84 160
70 % 102 105 159
50 % 225 233 98
40 % 225 233 121
30 % 294 312 63
Entity #2 | Chains: F
FASCICULIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 6578
95 % 9 10 6534
90 % 9 10 6508
70 % 10 11 5615
50 % 23 37 1220
40 % 49 118 266
30 % 50 120 276

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.