Sequence Similarity Clusters for the Entities in PDB 1MAE

Entity #1 | Chains: L
METHYLAMINE DEHYDROGENASE (LIGHT SUBUNIT) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29148
95 % 39 40 500
90 % 39 40 536
70 % 39 41 559
50 % 39 41 604
40 % 66 68 367
30 % 66 68 371
Entity #2 | Chains: H
METHYLAMINE DEHYDROGENASE (HEAVY SUBUNIT) protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25902
95 % 3 3 21902 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 3 3 21285
70 % 3 3 19524
50 % 3 4 11473
40 % 39 42 619
30 % 39 42 609

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.