Sequence Similarity Clusters for the Entities in PDB 1MA9

Entity #1 | Chains: A
Vitamin D-binding protein protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52378
95 % 3 6 7562 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.5
PDBFlex
90 % 3 6 7512
70 % 3 6 7318
50 % 3 6 6736
40 % 3 6 6278
30 % 3 6 5616
Entity #2 | Chains: B
Actin, Alpha Skeletal Muscle protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 124 21
95 % 77 181 14 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 79 186 14
70 % 82 191 20
50 % 82 194 25
40 % 83 213 36
30 % 84 233 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.