Sequence Similarity Clusters for the Entities in PDB 1MA9

Entity #1 | Chains: A
Vitamin D-binding protein protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49909
95 % 3 6 7148
90 % 3 6 7111
70 % 3 6 6918
50 % 3 6 6396
40 % 3 6 5967
30 % 3 6 5339
Entity #2 | Chains: B
Actin, Alpha Skeletal Muscle protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 52 123 22
95 % 77 174 15
90 % 79 179 16
70 % 81 182 25
50 % 81 184 38
40 % 82 203 42
30 % 83 223 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.