Sequence Similarity Clusters for the Entities in PDB 1M9X

Entity #1 | Chains: A,B,E,F
Cyclophilin A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 95 114
95 % 37 109 144
90 % 37 110 154
70 % 71 167 131
50 % 81 205 111
40 % 84 221 125
30 % 85 231 135
Entity #2 | Chains: C,D,G,H
HIV-1 Capsid protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 20727
95 % 5 27 715
90 % 6 28 712
70 % 6 28 754
50 % 8 32 702
40 % 8 32 743
30 % 9 35 700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.