Sequence Similarity Clusters for the Entities in PDB 1M9F

Entity #1 | Chains: A,B
Cyclophilin A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 101 121
95 % 53 115 147
90 % 53 116 156
70 % 87 173 133
50 % 98 211 111
40 % 101 228 128
30 % 102 238 133
Entity #2 | Chains: C,D
HIV-1 Capsid protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42083
95 % 6 45 192
90 % 7 46 198
70 % 7 46 226
50 % 9 50 239
40 % 9 50 264
30 % 10 53 266

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.