Sequence Similarity Clusters for the Entities in PDB 1M9F

Entity #1 | Chains: A,B
Cyclophilin A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 100 118
95 % 52 114 146
90 % 52 115 154
70 % 86 172 130
50 % 97 210 111
40 % 100 227 127
30 % 101 237 133
Entity #2 | Chains: C,D
HIV-1 Capsid protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41730
95 % 6 45 191
90 % 7 46 196
70 % 7 46 222
50 % 9 50 235
40 % 9 50 260
30 % 10 53 265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.